Browse of TCMCG015C41059 protein

CDS

Accession Number	TCMCG015C41059
gbkey	CDS
Protein Id	XP_027073067.1
Location	join(51529921..51530131,51530490..51530704,51531070..51531213,51531364..51531537,51533356..51533455,51534079..51534197,51534288..51534410,51534512..51534583,51534992..51535084,51535572..51535685,51535833..51535955,51536457..51536642,51536752..51536826,51537610..51537746,51538600..51538734,51539112..51539257,51539375..51539440,51540404..51540510,51540724..51540804,51540897..51540971,51541073..51541174,51543502..51543670,51543771..51543919,51544331..51544414,51544784..51544884,51546970..51547123,51547210..51547284,51547412..51547550,51548285..51548924,51551282..51551330,51551828..51551973,51552048..51552231,51552802..51552900,51553480..51553850,51553995..51554171,51556660..51556756,51556833..51556988,51557083..51557313,51557459..51557542,51557661..51557768)
Gene	LOC113697588
GeneID	113697588
Organism	Coffea arabica

Protein

Length	1936aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027217266.1
Definition	rRNA biogenesis protein RRP5-like isoform X2 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGAAGAAATCTCCGAACAAGAAATCATCTAAGAAGCCGTCTTTGAGAAATCTTCAGAAGCCATCAAAGAAACCCTTCAAATCAAAACCACCTAGAGACGGCGGCAAAGGCACCAAAACCGAATTGGGCGACCCCGTTTTGTCTCATCAACAAAAGCAAGCTTCACTTGCCCTGCAACTCGAAGATGACGTCCCCGACTTCCCCAGAGGTGGAGGTAGTTCACTGAGTAAACAGGAGCTGGAGGACGTGAGAGCAGAGGTAGATGCAGAGTTTGAGGCAGAGGAGAGAGTTTCGAAGAAGAAGAACAAAAGGGCAAAGCGGTTCGAATGGAGAAGCCAATCGGCAGAAGATGATATGGGCTCCCTTTTTGGTGATGCATTCACCGGAAAGTTGCCTAGGTTTGCAAATAAGATCACTTTGAAGAATATTTCTCCTGGCATGAAGCTTTGGGGCGTAATTTCAGAGGTAAATCAGAAAGATGTTGTGGTTAGTCTTCCAGGGGGTTTGCGTGGGTTAGTTCGTGCGAGTGAAGCATTTGATCCTCTTCCAAATGATGGAGTAAAAGGGGATATGGAAAGTAATTTTCTTTCAAGCATATATCATGTTGGGCAGCTTGTCTCGTGCATTGTGCAACAAGTGGATGATGAGAAGAAAGAAACTGGGAAAAGAAGAATTTGGCTTTCCCTTCGTCTTTCTTTACTGCACAAAGGCTTGACAATGGATATTATTCAAGAAGGAATGGTTCTTAGTGCATACATAAAAAGCATTGAAGACCATGGTTATACACTTAATTTTGGATTTGGTTCCTTTACTGGATTCATGCCCGAAAGCCACCAATCTGAAAGAAAGGACACAGAAGTGAAAGTTGGGCAGCTTATTCAAGGGGTCGTTAAAAGCATTGACAAAACTCGAAAATTGCTTTACATGAGCTCTGATTCTGATATGGTGTCAAAATGTGTGACCAAGGACCTTAAAGGTATTTCAATTGATCTTCTCGTTCCAGGCATGATGGTTGATGCTCGTGTTCGGTCATCCCTTGAAAATGGCATCATGTTATCATTCCTCACATACTTCACGGGAACTGTAGATATATTTAACTTAAGTGAGACTTTTCCCTCTGCTAACTGGAAAGATCATTACACCCAAGGCAAGAAGGTCAACGCTCGGATATTATTTATAGATCCTACAACTAGAGCTGTTGGTTTGACTCTGAATCCTCACCTAGTTCATAATAGAGCTCCACCTACACTGGTCCAAACTGGTGATATCTTTGATCAATCGAAAATAATCAGGATTGACAGGGGTTTGGGCCTTTTGCTCGAAATCCCCTCTTCTCCAGTAGCAACCCCTGCGTATGTTAGTGTGTCTGATGTTGCTGACAAGGAAATCAAGAAGCTAGAGAAAAATTTCAAAGAGGGAAGTCTTGTGCGAGTTAGAGTGCTTGGACTTAGGCACTTGGAAGGGCTTGCTACTGGGATTCTGAAGGCTAGTGCTTTTGAAGGGACAGTCTTTACTCATTCAGATGTCAAGCCTGGAATGGTTGTTAAGGCTAAAGTAATTGCAGTTGACAGCTTTGGTGCCATTGTGCAACTTGGAAGCGGTGTGAAAGCACTTTGTCCTCTTCGACACATGTCTGAGTTTGAGATAACAAAACCTAGAAAAAAGTTCCAGGTTGGAGCTGAACTAGTTTTCCGTGTTCTTGGTTGCAAGTCCAAGAGGATCACTGTTACACACAAGAAAACTCTAGTGAAGTCAAAGCTTGAAATTCTTAGTTCATATGCCGATGCCATTGAAGGACTAATAACCCATGGATGGATAACAAATATTGAGAACCATGGATGCTTTGTTCGCTTTTACAATGGTGTACAAGGATTTGCACCAAGATCTGAACTTGGTTTGGATCCGGGATGTGACATAAATTCAATGTATCATGTCGAGCAGGTTGTGAAATGTAGAGTGACCAGCTCTATACCTGCCTCAAGGAGAATCAACCTTAGTTTCACTGCAAAAAAAACAAGGATTGCTGAAGATGATATGATGAATCTTGGAAGCCTTGTATCTGGAGTTGTTGAGCAAGTAACTCCTCATGCAGTTGTGGTTTGTGTTAACTCCAAAAGTCACATTAAGGGTACCATCTCTCCTGAACATTTATCTGACCACCTAGGGCTTGGTGCATTGCTGAAATCAGTTCTGAAACCTGGACACCAGTTTGACAAACTCTTGGTTCTTGATATTGAAGGCAGCAATCTCATACTCACTGCTAAGTATTCGCTTGTGAATTCTGCCCGAGACCTTCCTTTGGATATCAAGCAAGTTTGCCCTCATTCAATAGTCCATGGATATGTGTGTAATCTAATCGAAGCTGGTTGCTTTGTTCGCTTTGTTGGGCGTTTGACTGGTTTTGCCCCAAAACATAAGGCAGTAGATGACAGGAGATCTGATGTTTCTGAAGTCTTTAGCATTGGTCAATCTGTTCGCTGTAACGTAGTTGATGTTAATAGTGAAACAAATAGAATAACACTTGCATTGAAGCAGTCGTTGTGTTCCTCGACAGATGCATCCTTTATTCGAGAGTACTTTCTTTTGGAAGACAAGATATCTAAACTGCAATTGCTGGGCTCTGAGAGCAGTGAATTAAATTGGGTTGACGAATTCCAAGTTGGAAGCATAATTGAGGGAAAAGTTAATGAAAAAAAGGAGTTTGGTGTGGTTATCAGCTTTGAGAAGTACAAAGACATTTTTGGCTTCATTTCCCAGTACCAGTTGGATGGAATTGCAGTGGATTTTGGTACAACTGTTCAGGCTGCAGTTCTTGATATATCAAAGAGTGAACGGCTGTTGGATTTGTCATTGAAACCACAGTTTGTTGAAAGGTCAAAACGTGAGGGCTCCAGTGTGCACTCTGTTAAGAAGAAACGTGGAAGGGAAACACATAAAGGGCTGGATCTGAAACAAACTGTTCATGCGCAAGTTGAGATTGTGAAAGAGGATTACTTGGTTCTGTCAATACCTACACATAATTTTGCTTTGGGTTATGCCTCGCTTGCTGATTACAATACTCAAATGCTTCCTCGGAAACAGTTTGTTAATGGGCAGAGTGTCGTAGCCACTGTTGCTGATCTTCCAAGTCCATCAACAGGTGGAAGGTTGCTATTACTGCTTAAATCTATGAATGAGGTTATGGATTCATCCACTTCGAAGCGCGCAAAAAGGAAGGCCAACATTGATGTTGGTTCTGTTGTTCAGGCAGAGATTACTGAAATCAAGCCTCTTGAACTTCGAGTAAAATTTGGTTCTGGTTTTCATGGGAGGGTACACATTACCGAGGCTACAGATGATAATCTTGCTGAAGATCCCTTCAACAGCCTCAGGGTTGGCCAGACAGTCAACGCAATGATTGTTTCGAAGTGTAATCGTAACAGAAGCTATCAATGGGAATTGTCCCTAAAACACTCGTTGCTTGCAGGTGCTGGTGAAGTAGAAGATGGGCTTCTTGTAGAAGATTTTGATTACCCTATTGGTGGAAGAGTTTCTGGGTTTGTTTATAAAGTGGACAAGGAATGGGCCTGGGTGACTGTATCTCGAGATGTCAGGGCACAATTGTATATTTTGGACAGTGCATCTGAGCCTACTGAACTTGAAAAGTTCGAGAAGCACTTTTACATAGGCATGGCTCTTTCAGGATATGTCATAAAAGCAGATAAGGAGAAAAAATTGTTACGGATTGTCCTGCACCCAATTCTCACTCATATAGACAGCGCTTGTAGCCTGAGTGACGGTTGTTCAACTAGTCCTTTAAATGGGAATAAAGCATGCCATATTAGTGTAGGTGGTTTTGTGGGTGGCAGAATATCTAAAATCCTTCCTGGTGTTGGCGGTGTACTTGTTCAAATTGATCAGCATCTCTATGGTAAGGTTCATTTTACTGAATTGACCAAGGCATGGGTCTCAGATCCACTTGCTGGATATCATGAGGGTCAATTTGTGAAATGCAAAGTCCTTGAAATTTCCCATTCTTTCAAGGGCACTGTACATGTTGATCTGTCACTACGGCTCACTTCAGATGATATGGATCATGGAAAGTTTGCTGATCTCTACCCTAGCATTCCACGTGTGGAGAATATTGAAGATCTTAAACCAGACATTGTTGTAAAGGGATATGTTAAGAACGTTAGTTCAAGAGGATGTTTTATTATGATTTCTCGGACGGTTGACGCAAAAATCCTCTTGTCAAACTTGTCGGACGGCTTTGTTGAGAATCCAGAGAAAGAATTTCCAGTTGGGAAACTTGTCATTGGCAGGGTGATATCTGTCGAACCTTTGTCCAAGCGAGTTGAAGTTACTCTTAAGACATCCAACAGTGTCAGTGTCTCAAAGTTGGACGTAAATTCTTTGAATAAGCTCACTGTTGGAGATTTCATTTCTGGAAGAGTTAAGCGCATTGAGTCATATGGCTTGTTTGTTACCATTGATGACACAAATCTGGTTGGCTTATGCCATGTCTCAGAGCTTTCTGATGAGCACATAGACAACATTGAAACAAAATACAAAGCTGGGGAGGTGGTCAGAGCTAAAGTTTTGAAGGTCGATAAGGAAAGACACCGCATTGCTCTTGGAATGAAAAATTCATATTTCACTGGTGATACAAATGATCAAAAACTTTCAGAACATGGGACTAATTCTGCTATTGAGGAAAATCATGTTTTTGAAGGCACTGGGGCAATAAGTTTTCCAGGGATTGATGATTTTGATATCAAGTCCGACAATGAAAAGCTTTCGGTTCTTGGTAAACTGGAATCGAGGGCTTCAATACGACCTCTTGATGTTCCATTGGATGAAATTGAAAACTCAGATGTGGATAATGTAGTTAATCAAGATCATGAGAATCCCAATGCTGCAGATATTATGGATGAAAAAAGCAAGAAACGTGAAAAGAAGAAAGCAAAGGTGGAGAGGGAACAAGAAATTCAAGCTGCTGAGGAGAGACTTCTAGAAAAAGGTATTCCAAGAAATGCTGATGAATTTGAGAAGCTTATTAGGACCTCCCCAAATAGCAGCTTTGTATGGATAAAGTACATGGCATTCATGCTCTCTTTGGCAGATGTTGAAAAGGCACGTTCCATTGCTGAGAGGGCTTTGAGAACTATAAACATCCGAGAGGAGTCTGAGAAGCTGAACATCTGGGTTGCATACTTCAACTTAGAAAATGAATATGGAAATCCTCCTGAGGAAGCTGTTAAGAAACTATTTTATAGAGCATTACAGTACTGCGATCCCAAAAAGCTGTACCTGGCCCTTCTGGGAATGTATGAAAGGACCGAGCAACATAAGTTGGCTGATGACCTTCTCGGCAAAATGATCAAGAAATTCAAGAGTTCATGCAAAGTTTGGCTAAGACGGGTTCAAAGACTCTTGCAGCAAAACCATGATGGAATACAGTCAAATATAAATCGGGCTCTTTTATGTCTACCTCGCCATAAGCATATCAAATTTATTTCACAGACTGCGATTCTTGAGTTCAAATGTGGGGTACCTGACAGGGGGCGATCATTGTTTGAGGGAATGCTGCGCGAGTATCCTAAAAGGATGGACTTGTGGAGCATTTATCTTGACCAGGAGATTCGACTAGGTGATGTAGATGTGATCCGTTCGTTGTTTGAGAGGGCAATAAGTTTGAGCCTTCCCCCTAAGAAAATGAAGTTCTTATTCACGAAGTATCTGGAGTATGAAAAATCTCTTGGTGACGAAGAAAGAGCAAGTACTGTGAGAGAAAAAGCAAGAGAGTATGTTGAGAGCAACGTCAAATGA

Protein:   MAKKSPNKKSSKKPSLRNLQKPSKKPFKSKPPRDGGKGTKTELGDPVLSHQQKQASLALQLEDDVPDFPRGGGSSLSKQELEDVRAEVDAEFEAEERVSKKKNKRAKRFEWRSQSAEDDMGSLFGDAFTGKLPRFANKITLKNISPGMKLWGVISEVNQKDVVVSLPGGLRGLVRASEAFDPLPNDGVKGDMESNFLSSIYHVGQLVSCIVQQVDDEKKETGKRRIWLSLRLSLLHKGLTMDIIQEGMVLSAYIKSIEDHGYTLNFGFGSFTGFMPESHQSERKDTEVKVGQLIQGVVKSIDKTRKLLYMSSDSDMVSKCVTKDLKGISIDLLVPGMMVDARVRSSLENGIMLSFLTYFTGTVDIFNLSETFPSANWKDHYTQGKKVNARILFIDPTTRAVGLTLNPHLVHNRAPPTLVQTGDIFDQSKIIRIDRGLGLLLEIPSSPVATPAYVSVSDVADKEIKKLEKNFKEGSLVRVRVLGLRHLEGLATGILKASAFEGTVFTHSDVKPGMVVKAKVIAVDSFGAIVQLGSGVKALCPLRHMSEFEITKPRKKFQVGAELVFRVLGCKSKRITVTHKKTLVKSKLEILSSYADAIEGLITHGWITNIENHGCFVRFYNGVQGFAPRSELGLDPGCDINSMYHVEQVVKCRVTSSIPASRRINLSFTAKKTRIAEDDMMNLGSLVSGVVEQVTPHAVVVCVNSKSHIKGTISPEHLSDHLGLGALLKSVLKPGHQFDKLLVLDIEGSNLILTAKYSLVNSARDLPLDIKQVCPHSIVHGYVCNLIEAGCFVRFVGRLTGFAPKHKAVDDRRSDVSEVFSIGQSVRCNVVDVNSETNRITLALKQSLCSSTDASFIREYFLLEDKISKLQLLGSESSELNWVDEFQVGSIIEGKVNEKKEFGVVISFEKYKDIFGFISQYQLDGIAVDFGTTVQAAVLDISKSERLLDLSLKPQFVERSKREGSSVHSVKKKRGRETHKGLDLKQTVHAQVEIVKEDYLVLSIPTHNFALGYASLADYNTQMLPRKQFVNGQSVVATVADLPSPSTGGRLLLLLKSMNEVMDSSTSKRAKRKANIDVGSVVQAEITEIKPLELRVKFGSGFHGRVHITEATDDNLAEDPFNSLRVGQTVNAMIVSKCNRNRSYQWELSLKHSLLAGAGEVEDGLLVEDFDYPIGGRVSGFVYKVDKEWAWVTVSRDVRAQLYILDSASEPTELEKFEKHFYIGMALSGYVIKADKEKKLLRIVLHPILTHIDSACSLSDGCSTSPLNGNKACHISVGGFVGGRISKILPGVGGVLVQIDQHLYGKVHFTELTKAWVSDPLAGYHEGQFVKCKVLEISHSFKGTVHVDLSLRLTSDDMDHGKFADLYPSIPRVENIEDLKPDIVVKGYVKNVSSRGCFIMISRTVDAKILLSNLSDGFVENPEKEFPVGKLVIGRVISVEPLSKRVEVTLKTSNSVSVSKLDVNSLNKLTVGDFISGRVKRIESYGLFVTIDDTNLVGLCHVSELSDEHIDNIETKYKAGEVVRAKVLKVDKERHRIALGMKNSYFTGDTNDQKLSEHGTNSAIEENHVFEGTGAISFPGIDDFDIKSDNEKLSVLGKLESRASIRPLDVPLDEIENSDVDNVVNQDHENPNAADIMDEKSKKREKKKAKVEREQEIQAAEERLLEKGIPRNADEFEKLIRTSPNSSFVWIKYMAFMLSLADVEKARSIAERALRTINIREESEKLNIWVAYFNLENEYGNPPEEAVKKLFYRALQYCDPKKLYLALLGMYERTEQHKLADDLLGKMIKKFKSSCKVWLRRVQRLLQQNHDGIQSNINRALLCLPRHKHIKFISQTAILEFKCGVPDRGRSLFEGMLREYPKRMDLWSIYLDQEIRLGDVDVIRSLFERAISLSLPPKKMKFLFTKYLEYEKSLGDEERASTVREKAREYVESNVK